A 768-marker Illumina GoldenGate array of SNP markers based on Trans-legume Orthologous Group (TOG) genes; marker physical coordinates relative to G19833.gnm1
A 768-marker Illumina GoldenGate array of SNP markers based on Trans-legume Orthologous Group (TOG) genes; marker physical coordinates relative to G19833.gnm2
A common bean genomic library was constructed using the ‘IAC-UNA’ variety enriched for (CT) and (GT) for microsatellite motifs. From 1,209 sequenced clones, 714 showed microsatellites distributed over 471 simple and 243 compound motifs.
Marker SNPs developed via Genotyping by Sequencing (GBS) of the Andean Diversity Panel; reads were mapped to the Phaseolus vulgaris G19833 v2.1 reference assembly.
A set of 52,201 SNPs reported by Escobar, Oladzad et al. (2022) based on genotyping-by-sequencing (GBS) of a multiparent advanced generation inter-cross (MAGIC) dry bean population of 1,050 F5:7 RILs. Reads were mapped and sorted against the G19833.gnm2 reference assembly for common bean.
A total of 150 microsatellite markers developed for common bean (Phaseolus vulgaris L.) were tested for parental polymorphism and used to determine the positions of 100 genetic loci on an integrated genetic map of the species.
Three cDNA libraries generated by the Bean EST project were analyzed for the presence of SSRs. A total of 219 expressed sequence tags (ESTs) were found to carry 240 SSRs (named EST-SSR), whereas 714 genomic sequences contained 471 SSRs (named genomic-SSR).
GWAS assessing soybean cyst nematode (SCN) (Heterodera glycines) resistance, seed coat color, and seed weight in 363 diverse accessions of common bean, P. vulgaris relative to the G19833 assembly 1.0
A set of 79 previously mapped bean (Phaseolus vulgaris) genomic (Bng) clones were partially sequenced. Sequence tagged site (STSs) were produced for 16 of the clones, 2 of which contain simple sequence repeats (SSRs).
Approximately 5 million SNP markers reported by Wu, Wang et al. 2020, identified from whole genome resequencing (WGRS) of 683 common bean genotypes, relative to the Phaseolus vulgaris assembly G19833.gnm1.
Around 15,000 common bean sequences (primarily EST contigs and EST singletons) were electronically positioned onto the common bean map using the shared syntentic blocks as references points.
Genotyping (variant) data for two diverse collections of Phaseolus vulgaris accessions: the Mesoamerican Diversity Panel (MDP) and the Andean Diversity Panel (ADP).