282 representative accessions from the University of Minnesota soybean breeding program using a genome-wide panel of 1536 single nucleotide polymorphism (SNP) markers and evaluated plant responses to SCN HG type 0
Utilizing an innovative GWAS in CSLRP, 44 QTL 199 alleles with 72.2 % contribution to SIFC variation were detected and organized into a QTL-allele matrix for cross design and gene annotation.
GWAS of Soybean Cyst Nematode (SCN) (Heterodera glycines) resistance for Soybean, relative to the Wm82.gnm2 assembly (originally reported with respect to Wm82.gnm1)
The aim of the present study was to investigate the genome-wide genetic architecture of resistance to SCN HG Type 2.5.7 (race 1) in landrace and elite cultivated soybeans.
Identification of quantitative trait loci (QTLs) for seed protein concentration in soybean and analysis for additive effects and epistatic effects of QTLs under multiple environments
Identification of QTL underlying the resistance of soybean to pod borer, Leguminivora glycinivorella (Mats.) obraztsov, and correlations with plant, pod and seed traits
Genetic analysis of antixenosis resistance to the common cutworm (Spodoptera litura Fabricius) and its relationship with pubescence characteristics in soybean (Glycine max (L.) Merr.).
Identification of QTL underlying soybean agglutinin content in soybean seeds and analysis for epistatic effects among multiple genetic backgrounds and environments
Genetic structure composed of additive QTL, epistatic QTL pairs and collective unmapped minor QTL conferring oil content and fatty acid components of soybeans
QTL in mega-environments: I. Universal and specific seed yield QTL detected in a population derived from a cross of high-yielding adapted × high-yielding exotic soybean lines
QTL in mega-environments: II. Agronomic trait QTL co-localized with seed yield QTL detected in a population derived from a cross of high-yielding adapted × high-yielding exotic soybean lines
Genetic control of soybean seed oil: I. QTL and genes associated with seed oil concentration in RIL populations derived from crossing moderately high-oil parents
Quantitative Trait Loci (QTL) that Underlie SCN Resistance in Soybean [Glycine max (L.) Merr.] PI438489B by 'Hamilton' Recombinant Inbred Line (RIL) Population
The 'PI 438489B' by 'Hamilton' SNP-based genetic linkage map of soybean [Glycine max (L.) Merr.] identified quantitative trait loci that underlie seedling SDS resistance
Identification and validation of quantitative trait loci for seed yield, oil and protein contents in two recombinant inbred line populations of soybean.
Variation of GmIRCHS (Glycine max inverted-repeat CHS pseudogene) is related to tolerance of low temperature-induced seed coat discoloration in yellow soybean
Genetic components and major QTL confer resistance to bean pyralid (Lamprosema indicata Fabricius) under multiple environments in four RIL populations of soybean
Mapping quantitative trait loci controlling soybean seed starch content in an interspecific cross of ‘Williams 82’ (Glycine max ) and ‘PI 366121’ (Glycine soja )
SoySNP50K is an Illumina Infinium II BeadChip that contains over 50,000 SNPs from soybean useful for genotyping a wide variety of cultivated and wild soybean accessions.
Universal Soy Linkage Panel (USLP 1.0) contains 1536 SNPs selected based on even distribution throughout each of the 20 consensus linkage groups and to have a broad range of allele frequencies in diverse germplasm.
SNP markers generated Specific Locus Amplified Fragment Sequencing (SLAF-seq) approach, and showing association with resistance against two soybean cyst nematode types.
SoySNP50K is an Illumina Infinium II BeadChip that contains over 50,000 SNPs from soybean useful for genotyping a wide variety of cultivated and wild soybean accessions.
Diverse soybean accessions (462) were screened for resistance to SCN and genotyped using SoySNP50K Infinium Chip and a set of 3 funtional KASP SNP markers, identifying both 88788-type and Peking-type resistance.
SLAF-seq markers associated with resistance to soybean cyst nematode (SCN) HG type 2.5.7, with respect to Wm82 gnm2 coordinates (derived via sequence homology, from markers originally with positions in Wm82 gnm1).
Imputed genotypes for 5176 Nested Association Mapping RILs relative to 40 NAM parental genotypes, genotyped using the SoySNP50K and SoyNAM6K assays. These data sets report alleles at 29,417 SNP positions.
Imputed genotypes for 5176 Nested Association Mapping RILs relative to 40 NAM parental genotypes, genotyped with WGS and the SoySNP50K and SoyNAM6K assays. These data sets report alleles at 423,419 SNP positions.
Variant information for 481 soybean accessions (Glycine max and Glycine soja), provided by Babu Valliyodan and Henry Nguyen, as part of the United Soybean Board project to genotype and characterize diverse accessions.
Variant information for 1,556 resequenced soybean accessions Glycine max and Glycine soja, provided by Yong-Qiang (Charles) An and Rick Meyers, relative to Wm82 assembly 2.